ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ekiA1 - ECOD Domain | ECOD

ECOD/Domains/e3ekiA1

e3ekiA1

UID: 001524695

PDB

Range: A:148-341
PDB: 3EKI chain A(all domains)
UniProt: P15363 (all domains)
Gene: p37

Molecule: High affinity transport system protein p37

3D Structure

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Related Domains

Browse other domains in CypI →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyCypI(7523.1.1.18)

Ligands

in contact, ≤ 4 Å

Bromide ionBR
Calcium ionCA
metal
Thiamine diphosphateTPP

+ 1 additive (Glycerin)

Pfam Families

Extracytoplasmic thiamine-binding lipoprotein

ClanCL0177PBP

External Links

ECOD PDB View: 3EKI RCSB PDB: 3EKI PDBe: 3EKI UniProt: P15363

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.