ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2hzkB1 - ECOD Domain | ECOD

ECOD/Domains/e2hzkB1

e2hzkB1

UID: 001524935

PDB

Range: B:30-153,B:245-337
PDB: 2HZK chain B(all domains)
UniProt: Q3J1R2 (all domains)
Gene: takP

Molecule: TRAP-T family sorbitol/mannitol transporter, periplasmic binding protein, SmoM

3D Structure

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Related Domains

Browse other domains in DctP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 2HZK RCSB PDB: 2HZK PDBe: 2HZK UniProt: Q3J1R2

Downloads

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