ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mhfA2 - ECOD Domain | ECOD

ECOD/Domains/e4mhfA2

e4mhfA2

UID: 001525317

PDB

Range: A:31-151,A:217-330
PDB: 4MHF chain A(all domains)
UniProt: Q128M1 (all domains)
Gene: Bpro_3107

Molecule: TRAP dicarboxylate transporter, DctP subunit

3D Structure

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Related Domains

Browse other domains in DctP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

beta-D-glucuronic acidBDP
drugDrugBank DB03156
alpha-D-glucopyranuronic acidGCU

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 4MHF RCSB PDB: 4MHF PDBe: 4MHF UniProt: Q128M1

Downloads

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