ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ovtB1 - ECOD Domain | ECOD

ECOD/Domains/e4ovtB1

e4ovtB1

UID: 001525451

PDB

Range: B:24-146,B:236-324
PDB: 4OVT chain B(all domains)
UniProt: A6X5V3 (all domains)
Gene: Oant_3902

Molecule: TRAP dicarboxylate transporter, DctP subunit

3D Structure

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Related Domains

Browse other domains in DctP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
6-deoxy-L-galactonic acidLFC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 4OVT RCSB PDB: 4OVT PDBe: 4OVT UniProt: A6X5V3

Downloads

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