ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ub8A1 - ECOD Domain | ECOD

ECOD/Domains/e3ub8A1

e3ub8A1

UID: 001525684

PDB

Range: A:44-200
PDB: 3UB8 chain A(all domains)
UniProt: B6JPK4 (all domains)
Gene: tlpB

Molecule: chemoreceptor TlpB

3D Structure

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Related Domains

Browse other domains in sCache_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilysCache_2(223.1.1.97)

Ligands

in contact, ≤ 4 Å

FormamideARF

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

PF17200sCache_2

Single Cache domain 2

ClanCL0165Cache

External Links

ECOD PDB View: 3UB8 RCSB PDB: 3UB8 PDBe: 3UB8 UniProt: B6JPK4

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.