ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4petB2 - ECOD Domain | ECOD

ECOD/Domains/e4petB2

e4petB2

UID: 001525871

PDB

Range: B:156-245
PDB: 4PET chain B(all domains)
UniProt: Q48AL6 (all domains)
Gene: CPS_0129

Molecule: Extracellular solute-binding protein, family 7

3D Structure

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Related Domains

Browse other domains in DctP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

ECOD PDB View: 4PET RCSB PDB: 4PET PDBe: 4PET UniProt: Q48AL6

Downloads

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