ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4oxvA2 - ECOD Domain | ECOD

ECOD/Domains/e4oxvA2

e4oxvA2

UID: 001526263

PDB

Range: A:32-128,A:228-277
PDB: 4OXV chain A(all domains)
UniProt: A0A0J9X1Z1 (all domains)
Gene: CF510_16633

Molecule: Membrane-bound lytic murein transglycosylase F

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

ValineVAL
drugDrugBank DB00161

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 4OXV RCSB PDB: 4OXV PDBe: 4OXV UniProt: A0A0J9X1Z1

Downloads

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