ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gmjB1 - ECOD Domain | ECOD

ECOD/Domains/e4gmjB1

e4gmjB1

UID: 000152951

PDB

Range: B:10-280
PDB: 4GMJ chain B(all domains)
UniProt: Q9UIV1 (all domains)
Gene: CNOT7

Molecule: CCR4-NOT transcription complex subunit 7

3D Structure

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Related Domains

Browse other domains in CAF1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyCAF1(2484.1.1.45)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

CAF1 family ribonuclease

ClanCL0219RNase_H

External Links

ECOD PDB View: 4GMJ RCSB PDB: 4GMJ PDBe: 4GMJ UniProt: Q9UIV1

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.