ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4g8aC1 - ECOD Domain | ECOD

ECOD/Domains/e4g8aC1

e4g8aC1

UID: 000153207

PDB

Range: C:19-158
PDB: 4G8A chain C(all domains)
UniProt: Q9Y6Y9 (all domains)
Gene: LY96

Molecule: Lymphocyte antigen 96

3D Structure

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Related Domains

Browse other domains in E1_DerP2_DerF2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyE1_DerP2_DerF2(11.1.1.37)

Ligands

in contact, ≤ 4 Å

Lauric acidDAO
drugDrugBank DB03017
Myristic acidMYR
drugDrugBank DB08231
N-Acetylglucosamine

Pfam Families

PF02221E1_DerP2_DerF2

ML domain

ClanCL0532LIG

External Links

ECOD PDB View: 4G8A RCSB PDB: 4G8A PDBe: 4G8A UniProt: Q9Y6Y9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB00141

2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-4-O-phosphono-beta-D-glucopyranoseLP4

(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATELP5

Shown in the structure viewer. Drug annotations from DrugDomain.