ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gtsA1 - ECOD Domain | ECOD

ECOD/Domains/e4gtsA1

e4gtsA1

UID: 000153404

PDB

Range: A:13-330
PDB: 4GTS chain A(all domains)
UniProt: Q08602 (all domains)
Gene: Rabggta

Molecule: Geranylgeranyl transferase type-2 subunit alpha

3D Structure

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Related Domains

Browse other domains in PPTA →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

5-{(3R)-3-(4-hydroxybenzyl)-4-[(4-methoxyphenyl)sulfonyl]-1-[(1-methyl-1H-imidazol-5-yl)methyl]-2,3,4,5-tetrahydro-1H-1,4-benzodiazepin-7-yl}furan-2-carbaldehyde7TP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 4GTS RCSB PDB: 4GTS PDBe: 4GTS UniProt: Q08602

Downloads

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