ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4heiA1 - ECOD Domain | ECOD

ECOD/Domains/e4heiA1

e4heiA1

UID: 000153426

PDB

Range: A:1-95
PDB: 4HEI chain A(all domains)
UniProt: H9L4N9 (all domains)
Gene: VC_2530

Molecule: RIBOSOME HIBERNATION PROTEIN YHBH

3D Structure

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Related Domains

Browse other domains in Ribosomal_S30AE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupRibosome binding protein Y (YfiA homologue)(330.2)

TT-groupRibosome binding protein Y (YfiA homologue)(330.2.1)

FFamilyRibosomal_S30AE(330.2.1.1)

Ligands

in contact, ≤ 4 Å

COBALT (III) ION3CO
metal
Thiocyanate ionSCN
Unknown ligandUNL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02482Ribosomal_S30AE

Sigma 54 modulation protein / S30EA ribosomal protein

ClanCL0219RNase_H

External Links

ECOD PDB View: 4HEI RCSB PDB: 4HEI PDBe: 4HEI UniProt: H9L4N9

Downloads

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