ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4dj4B1 - ECOD Domain | ECOD

ECOD/Domains/e4dj4B1

e4dj4B1

UID: 000153668

PDB

Range: B:26-290
PDB: 4DJ4 chain B(all domains)
UniProt: Q0KFV0 (all domains)
Gene: tbn1

Molecule: Nuclease

3D Structure

Loading viewer...

Related Domains

Browse other domains in S1-P1_nuclease →

Classification

AArchitecturealpha bundles(a.7)

XX-groupPhospholipase C/P1 nuclease(177)

HH-groupPhospholipase C/P1 nuclease(177.1)

TT-groupPhospholipase C/P1 nuclease(177.1.1)

FFamilyS1-P1_nuclease(177.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal
Zinc ionZN
metal

Shown in the structure viewer.

Pfam Families

PF02265S1-P1_nuclease

S1/P1 Nuclease

ClanCL0368PhosC-NucP1

External Links

ECOD PDB View: 4DJ4 RCSB PDB: 4DJ4 PDBe: 4DJ4 UniProt: Q0KFV0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.