ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4f9zD1 - ECOD Domain | ECOD

ECOD/Domains/e4f9zD1

e4f9zD1

UID: 000154266

PDB

Range: D:143-256
PDB: 4F9Z chain D(all domains)
UniProt: Q96DN0 (all domains)
Gene: ERP27

Molecule: Endoplasmic reticulum resident protein 27

3D Structure

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Related Domains

Browse other domains in Thioredoxin_6 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyThioredoxin_6(2485.1.1.43)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate ion, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL)

Acetate ionACT
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLPE3

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13848Thioredoxin_6

Thioredoxin-like domain

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 4F9Z RCSB PDB: 4F9Z PDBe: 4F9Z UniProt: Q96DN0

Downloads

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