ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bvgA2 - ECOD Domain | ECOD

ECOD/Domains/e4bvgA2

e4bvgA2

UID: 001543627

PDB

Range: A:250-291
PDB: 4BVG chain A(all domains)
UniProt: Q9NTG7 (all domains)
Gene: SIRT3

Molecule: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-3, MITOCHONDRIAL

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilySIR2(375.1.1.18)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
(2R,3R,4S,5R)-5-({[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}METHYL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL ACETATEXYQ
within 5 Å only

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4BVG RCSB PDB: 4BVG PDBe: 4BVG UniProt: Q9NTG7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.