ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1s7gC1 - ECOD Domain | ECOD

ECOD/Domains/e1s7gC1

e1s7gC1

UID: 001544069

PDB

Range: C:120-162
PDB: 1S7G chain C(all domains)
UniProt: O30124 (all domains)
Gene: cobB2

Molecule: NAD-dependent deacetylase 2

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilySIR2(375.1.1.18)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
Hexaethylene glycolP6G
within 5 Å only

+ 2 additives (Sulfate ion, Tetraethylene glycol)

Sulfate ion

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1S7G RCSB PDB: 1S7G PDBe: 1S7G UniProt: O30124

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.