ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yc2A3 - ECOD Domain | ECOD

ECOD/Domains/e1yc2A3

e1yc2A3

UID: 001544175

PDB

Range: A:120-162
PDB: 1YC2 chain A(all domains)
UniProt: O30124 (all domains)
Gene: cobB2

Molecule: NAD-dependent deacetylase 2

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilySIR2(375.1.1.18)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (1,2-ETHANEDIOL, Sulfate ion)

1,2-ETHANEDIOLEDO
Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1YC2 RCSB PDB: 1YC2 PDBe: 1YC2 UniProt: O30124

Downloads

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Drug annotations from DrugDomain.