ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4y13A1 - ECOD Domain | ECOD

ECOD/Domains/e4y13A1

e4y13A1

UID: 001545340

PDB

Range: A:1-157
PDB: 4Y13 chain A(all domains)
UniProt: Q8XBD0 (all domains)
Gene: sdiA

Molecule: Transcriptional regulator of ftsQAZ gene cluster

3D Structure

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Related Domains

Browse other domains in Autoind_bind →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyAutoind_bind(223.1.1.7)

Ligands

in contact, ≤ 4 Å

(2S)-2,3-dihydroxypropyl octanoate480

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

PF03472Autoind_bind

Autoinducer binding domain

ClanCL0161GAF

External Links

ECOD PDB View: 4Y13 RCSB PDB: 4Y13 PDBe: 4Y13 UniProt: Q8XBD0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.