ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3h41A1 - ECOD Domain | ECOD

ECOD/Domains/e3h41A1

e3h41A1

UID: 001545878

PDB

Range: A:209-333
PDB: 3H41 chain A(all domains)
UniProt: Q736M3 (all domains)
Gene: ykfC

Molecule: NLP/P60 family protein

3D Structure

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Related Domains

Browse other domains in NLPC_P60 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyNLPC_P60(219.1.1.8)

Ligands

in contact, ≤ 4 Å

AlanineALA
drugDrugBank DB00160
D-Glutamic AcidDGL
drugDrugBank DB02517

+ 1 additive (Tetraethylene glycol)

Pfam Families

PF00877NLPC_P60

NlpC/P60 family

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 3H41 RCSB PDB: 3H41 PDBe: 3H41 UniProt: Q736M3

Downloads

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Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.