ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3h41A3 - ECOD Domain | ECOD

ECOD/Domains/e3h41A3

e3h41A3

UID: 001545880

RepresentativePDB

Range: A:130-209
PDB: 3H41 chain A(all domains)
UniProt: Q736M3 (all domains)
Gene: ykfC

Molecule: NLP/P60 family protein

3D Structure

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Related Domains

Browse other domains in SH3_YKFC_2nd →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySH3_YKFC_2nd(4.1.1.278)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, Tetraethylene glycol)

Phosphate ionPO4
DrugBank DB14523
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF23795SH3_YKFC_2nd

YKFC SH3b2 domain

ClanCL0010SH3

External Links

ECOD PDB View: 3H41 RCSB PDB: 3H41 PDBe: 3H41 UniProt: Q736M3

Downloads

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