ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4omkB2 - ECOD Domain | ECOD

ECOD/Domains/e4omkB2

e4omkB2

UID: 001546470

PDB

Range: B:74-274
PDB: 4OMK chain B(all domains)
UniProt: O76054 (all domains)
Gene: SEC14L2

Molecule: SEC14-like protein 2

3D Structure

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Related Domains

Browse other domains in CRAL_TRIO →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSpoIIaa-like(2496)

HH-groupSpoIIaa-like(2496.1)

TT-groupSpoIIaa-like(2496.1.1)

FFamilyCRAL_TRIO(2496.1.1.1)

Ligands

in contact, ≤ 4 Å

SqualeneSQL
drugDrugBank DB11460
Chloride ionCL

+ 2 additives (Isopropyl alcohol, Sulfate ion)

Isopropyl alcohol

Pfam Families

PF00650CRAL_TRIO

CRAL/TRIO domain

ClanCL0512CRAL_TRIO

External Links

ECOD PDB View: 4OMK RCSB PDB: 4OMK PDBe: 4OMK UniProt: O76054

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02325

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.