ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yd0A1 - ECOD Domain | ECOD

ECOD/Domains/e4yd0A1

e4yd0A1

UID: 001546764

PDB

Range: A:21-183
PDB: 4YD0 chain A(all domains)
UniProt: Q30NP1 (all domains)
Gene: PB2

Molecule: Polymerase basic protein 2

3D Structure

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Related Domains

Browse other domains in Flu_PB2_5th →

Classification

AArchitecturea+b three layers(a.12)

XX-groupPolymerase basic protein 2 cap-binding domain(3521)

HH-groupPolymerase basic protein 2 cap-binding domain(3521.1)

TT-groupPolymerase basic protein 2 cap-binding domain(3521.1.1)

FFamilyFlu_PB2_5th(3521.1.1.1)

Ligands

in contact, ≤ 4 Å

2-(5-chloro-1H-pyrrolo[2,3-b]pyridin-3-yl)-5-fluoro-N-[(1R,2S,3S,4R)-3-(1H-tetrazol-5-yl)bicyclo[2.2.2]oct-2-yl]pyrimidin-4-amine4EW

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00604Flu_PB2_5th

Influenza RNA polymerase PB2 CAP binding domain

External Links

ECOD PDB View: 4YD0 RCSB PDB: 4YD0 PDBe: 4YD0 UniProt: Q30NP1

Downloads

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