ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2d5wB1 - ECOD Domain | ECOD

ECOD/Domains/e2d5wB1

e2d5wB1

UID: 001547076

PDB

Range: B:1-42,B:158-184,B:208-296,B:554-602
PDB: 2D5W chain B(all domains)
UniProt: Q5SHU6 (all domains)
Gene: TTHA1634

Molecule: peptide ABC transporter, peptide-binding protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 2D5W RCSB PDB: 2D5W PDBe: 2D5W UniProt: Q5SHU6

Downloads

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