ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ycoB1 - ECOD Domain | ECOD

ECOD/Domains/e4ycoB1

e4ycoB1

UID: 001548444

PDB

Range: B:1-312
PDB: 4YCO chain B(all domains)
UniProt: P33371 (all domains)
Gene: dusC

Molecule: tRNA-dihydrouridine synthase C

3D Structure

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Related Domains

Browse other domains in Dus →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDus(2002.1.1.56)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Dihydrouridine synthase (Dus)

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4YCO RCSB PDB: 4YCO PDBe: 4YCO UniProt: P33371

Downloads

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