ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ywqA1 - ECOD Domain | ECOD

ECOD/Domains/e4ywqA1

e4ywqA1

UID: 001548754

PDB

Range: A:271-328
PDB: 4YWQ chain A(all domains)
UniProt: Q5TC82 (all domains)
Gene: RC3H1

Molecule: Roquin-1

3D Structure

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Related Domains

Browse other domains in ROQ_II →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyROQ_II(101.1.1.83)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

Roquin II domain

ClanCL0123HTH

External Links

ECOD PDB View: 4YWQ RCSB PDB: 4YWQ PDBe: 4YWQ UniProt: Q5TC82

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.