ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5aj3p1 - ECOD Domain | ECOD

ECOD/Domains/e5aj3p1

e5aj3p1

UID: 001549050

RepresentativePDB

Range: p:51-238
PDB: 5AJ3 chain p(all domains)
UniProt: Q767K8 (all domains)
Gene: MRPS18B

Molecule: MITORIBOSOMAL PROTEIN MS40, MRPS18B

3D Structure

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Related Domains

Browse other domains in Ribosomal_S18 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyRibosomal_S18(101.1.1.7)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01084Ribosomal_S18

Ribosomal protein S18

ClanCL0123HTH

External Links

ECOD PDB View: 5AJ3 RCSB PDB: 5AJ3 PDBe: 5AJ3 UniProt: Q767K8

Downloads

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