ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xj6A2 - ECOD Domain | ECOD

ECOD/Domains/e4xj6A2

e4xj6A2

UID: 001549330

PDB

Range: A:2-200,A:236-265
PDB: 4XJ6 chain A(all domains)
UniProt: Q6XGD8 (all domains)
Gene: dncV

Molecule: VC0179-like protein

3D Structure

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Related Domains

Browse other domains in DncV-like_NTFase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyDncV-like_NTFase(316.1.1.34)

Ligands

in contact, ≤ 4 Å

3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATEGH3
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21654DncV-like_NTFase

Cyclic GMP-AMP synthase DncV-like, nucleotidyltransferase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 4XJ6 RCSB PDB: 4XJ6 PDBe: 4XJ6 UniProt: Q6XGD8

Downloads

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