ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3x1lB1 - ECOD Domain | ECOD

ECOD/Domains/e3x1lB1

e3x1lB1

UID: 001554141

PDB

Range: B:1-201
PDB: 3X1L chain B(all domains)
UniProt: Q8U1S7 (all domains)
Gene: cmr3

Molecule: CRISPR system Cmr subunit Cmr3

3D Structure

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Related Domains

Browse other domains in Cas_Cmr3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCas_Cmr3(304.51.1.6)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09700Cas_Cmr3

CRISPR-associated protein (Cas_Cmr3)

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 3X1L RCSB PDB: 3X1L PDBe: 3X1L UniProt: Q8U1S7

Downloads

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