ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4us6B1 - ECOD Domain | ECOD

ECOD/Domains/e4us6B1

e4us6B1

UID: 001554311

PDB

Range: B:2-388
PDB: 4US6 chain B(all domains)
UniProt: P24300 (all domains)
Gene: xylA

Molecule: XYLOSE ISOMERASE

3D Structure

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Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Magnesium ionMG
metal
Sodium ionNA

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4US6 RCSB PDB: 4US6 PDBe: 4US6 UniProt: P24300

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.