ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pg4B3 - ECOD Domain | ECOD

ECOD/Domains/e4pg4B3

e4pg4B3

UID: 001556727

PDB

Range: B:353-426
PDB: 4PG4 chain B(all domains)
UniProt: A0A0M3KKV6 (all domains)
Gene: U5K_01898

Molecule: Homoserine dehydrogenase

3D Structure

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Related Domains

Browse other domains in HSD_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupACT-like(304.8)

TT-groupACT-like(304.8.1)

FFamilyHSD_C(304.8.1.19)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Dimethyl sulfoxide, Acetate ion, Glycerol)

Dimethyl sulfoxideDMS
DrugBank DB01093
Acetate ionACT
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Homoserine dehydrogenase C-terminal domain

ClanCL0070ACT

External Links

ECOD PDB View: 4PG4 RCSB PDB: 4PG4 PDBe: 4PG4 UniProt: A0A0M3KKV6

Downloads

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