ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4rw5A1 - ECOD Domain | ECOD

ECOD/Domains/e4rw5A1

e4rw5A1

UID: 001557573

PDB

Range: A:2-279
PDB: 4RW5 chain A(all domains)
UniProt: P0CE82 (all domains)

Molecule: Phospholipase D LiSicTox-alphaIA1bii

3D Structure

Loading viewer...

Related Domains

Browse other domains in GDPD_2, SPH →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGDPD_2, SPH(2002.1.1.269)

Ligands

in contact, ≤ 4 Å

Caprylic acidOCA
drugDrugBank DB04519
Palmitic AcidPLM
drugDrugBank DB03796
N-Tridecanoic Acid

Pfam Families

Glycerophosphoryl diester phosphodiesterase family

ClanCL0036TIM_barrel

Dermonecrotic toxin SPH

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4RW5 RCSB PDB: 4RW5 PDBe: 4RW5 UniProt: P0CE82

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB02448

Magnesium ionMG

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.