ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ajtB1 - ECOD Domain | ECOD

ECOD/Domains/e5ajtB1

e5ajtB1

UID: 001558014

PDB

Range: B:24-240
PDB: 5AJT chain B(all domains)
UniProt: M1VUY5 (all domains)
Gene: CPUR_02269

Molecule: PHOSPHORIBOHYDROLASE LONELY GUY

3D Structure

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Related Domains

Browse other domains in Lysine_decarbox →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMCP/YpsA-related(7563)

HH-groupMCP/YpsA-related(7563.1)

TT-groupMCP/YpsA-related(7563.1.1)

FFamilyLysine_decarbox(7563.1.1.2)

Ligands

in contact, ≤ 4 Å

D-tartaric acidTAR
drugDrugBank DB01694

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03641Lysine_decarbox

Possible lysine decarboxylase

ClanCL0349SLOG

External Links

ECOD PDB View: 5AJT RCSB PDB: 5AJT PDBe: 5AJT UniProt: M1VUY5

Downloads

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