ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3wz3A1 - ECOD Domain | ECOD

ECOD/Domains/e3wz3A1

e3wz3A1

UID: 001558627

RepresentativePDB

Range: A:90-226
PDB: 3WZ3 chain A(all domains)
UniProt: Q9R2H2 (all domains)
Gene: traM

Molecule: TraM protein

3D Structure

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Related Domains

Browse other domains in T4BSS_DotI_IcmL →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupNTF2-like(243.1)

TT-groupNTF2-like(243.1.1)

FFamilyT4BSS_DotI_IcmL(243.1.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11393T4BSS_DotI_IcmL

Type-IV b secretion system, inner-membrane complex component

ClanCL0051NTF2

External Links

ECOD PDB View: 3WZ3 RCSB PDB: 3WZ3 PDBe: 3WZ3 UniProt: Q9R2H2

Downloads

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