ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xupD1 - ECOD Domain | ECOD

ECOD/Domains/e4xupD1

e4xupD1

UID: 001560704

PDB

Range: D:2-160
PDB: 4XUP chain D(all domains)
UniProt: O69230 (all domains)
Gene: xynC

Molecule: Endo-1,4-beta-xylanase C

3D Structure

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Related Domains

Browse other domains in CBM_4_9 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyCBM_4_9(10.32.1.8)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02018CBM_4_9

Carbohydrate binding domain

ClanCL0202GBD

External Links

ECOD PDB View: 4XUP RCSB PDB: 4XUP PDBe: 4XUP UniProt: O69230

Downloads

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