ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4u8uO1 - ECOD Domain | ECOD

ECOD/Domains/e4u8uO1

e4u8uO1

UID: 001562392

RepresentativePDB

Range: O:57-96
PDB: 4U8U chain O(all domains)
UniProt: A0A0M3KKY1 (all domains)

Molecule: Linker L3

3D Structure

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Related Domains

Browse other domains in Ldl_recept_a →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupLDL receptor-like module(389.3)

TT-groupLDL receptor-like module(389.3.1)

FFamilyLdl_recept_a(389.3.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00057Ldl_recept_a

Low-density lipoprotein receptor domain class A

External Links

ECOD PDB View: 4U8U RCSB PDB: 4U8U PDBe: 4U8U UniProt: A0A0M3KKY1

Downloads

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