ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yabB2 - ECOD Domain | ECOD

ECOD/Domains/e4yabB2

e4yabB2

UID: 001562742

PDB

Range: B:882-1006
PDB: 4YAB chain B(all domains)
UniProt: O15164 (all domains)
Gene: TRIM24

Molecule: Transcription intermediary factor 1-alpha

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

1-methyl-5-(2-methyl-1,3-thiazol-4-yl)-1,3-dihydro-2H-indol-2-one4CN

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 4YAB RCSB PDB: 4YAB PDBe: 4YAB UniProt: O15164

Downloads

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