ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yadA1 - ECOD Domain | ECOD

ECOD/Domains/e4yadA1

e4yadA1

UID: 001562743

PDB

Range: A:882-1006
PDB: 4YAD chain A(all domains)
UniProt: O15164 (all domains)
Gene: TRIM24

Molecule: Transcription intermediary factor 1-alpha

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

2,4-dimethoxy-N-(1-methyl-2-oxo-1,2,3,4-tetrahydroquinolin-6-yl)benzenesulfonamide4A7
Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 4YAD RCSB PDB: 4YAD PDBe: 4YAD UniProt: O15164

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.