ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yc9A1 - ECOD Domain | ECOD

ECOD/Domains/e4yc9A1

e4yc9A1

UID: 001562763

PDB

Range: A:882-1006
PDB: 4YC9 chain A(all domains)
UniProt: O15164 (all domains)
Gene: TRIM24

Molecule: Transcription intermediary factor 1-alpha

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

N-(6-{3-[4-(dimethylamino)butoxy]-5-propoxyphenoxy}-1,3-dimethyl-2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)-3,4-dimethoxybenzenesulfonamide4C1

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 4YC9 RCSB PDB: 4YC9 PDBe: 4YC9 UniProt: O15164

Downloads

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