ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5bv2R3 - ECOD Domain | ECOD

ECOD/Domains/e5bv2R3

e5bv2R3

UID: 001562941

PDB

Range: R:598-753
PDB: 5BV2 chain R(all domains)
UniProt: P21179 (all domains)
Gene: katE

Molecule: Catalase HPII

3D Structure

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Related Domains

Browse other domains in Catalase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyCatalase_C(2007.1.1.20)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, Triethylene glycol)

1,2-ETHANEDIOLEDO
Triethylene glycolPGE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18011Catalase_C

C-terminal domain found in long catalases

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 5BV2 RCSB PDB: 5BV2 PDBe: 5BV2 UniProt: P21179

Downloads

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