ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3d2jA3 - ECOD Domain | ECOD

ECOD/Domains/e3d2jA3

e3d2jA3

UID: 001563101

PDB

Range: A:243-524
PDB: 3D2J chain A(all domains)
UniProt: P30986 (all domains)
Gene: BBE1

Molecule: berberine bridge-forming enzyme

3D Structure

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Related Domains

Browse other domains in BBE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer.

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 3D2J RCSB PDB: 3D2J PDBe: 3D2J UniProt: P30986

Downloads

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Drug annotations from DrugDomain.