ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4fajA3 - ECOD Domain | ECOD

ECOD/Domains/e4fajA3

e4fajA3

UID: 001563110

PDB

Range: A:58-92,A:213-316,A:534-564
PDB: 4FAJ chain A(all domains)
UniProt: Q51643 (all domains)
Gene: prgZ

Molecule: PrgZ

3D Structure

Loading viewer...

Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 4FAJ RCSB PDB: 4FAJ PDBe: 4FAJ UniProt: Q51643

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure