ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3wz4E1 - ECOD Domain | ECOD

ECOD/Domains/e3wz4E1

e3wz4E1

UID: 001563490

PDB

Range: E:69-207
PDB: 3WZ4 chain E(all domains)
UniProt: O54626 (all domains)
Gene: dotI

Molecule: DotI

3D Structure

Loading viewer...

Related Domains

Browse other domains in T4BSS_DotI_IcmL →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupNTF2-like(243.1)

TT-groupNTF2-like(243.1.1)

FFamilyT4BSS_DotI_IcmL(243.1.1.15)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11393T4BSS_DotI_IcmL

Type-IV b secretion system, inner-membrane complex component

ClanCL0051NTF2

External Links

ECOD PDB View: 3WZ4 RCSB PDB: 3WZ4 PDBe: 3WZ4 UniProt: O54626

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure