ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pugA1 - ECOD Domain | ECOD

ECOD/Domains/e3pugA1

e3pugA1

UID: 001563532

RepresentativePDB

Range: A:2-282,A:331-354,A:387-432
PDB: 3PUG chain A(all domains)
UniProt: D4GTL2 (all domains)
Gene: aceB

Molecule: Malate Synthase

3D Structure

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Related Domains

Browse other domains in MSH_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMSH_C(2002.1.1.256)

Ligands

in contact, ≤ 4 Å

Glyoxylic acidGLV
drugDrugBank DB04343
Chloride ionCL
Potassium ionK

Pfam Families

Malate synthase H C-terminal domain

External Links

ECOD PDB View: 3PUG RCSB PDB: 3PUG PDBe: 3PUG UniProt: D4GTL2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.