ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d56A4 - ECOD Domain | ECOD

ECOD/Domains/e4d56A4

e4d56A4

UID: 001563617

PDB

Range: A:327-408
PDB: 4D56 chain A(all domains)
UniProt: G0WVH3 (all domains)
Gene: apnA

Molecule: APNAA1

3D Structure

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Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011)

HH-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011.1)

TT-groupbeta-barrel domain in acetyl-CoA synthetase-like proteins(4011.1.1)

FFamilyAMP-binding(4011.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 4D56 RCSB PDB: 4D56 PDBe: 4D56 UniProt: G0WVH3

Downloads

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Drug annotations from DrugDomain.