ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wgkB1 - ECOD Domain | ECOD

ECOD/Domains/e4wgkB1

e4wgkB1

UID: 001565225

PDB

Range: B:99-637
PDB: 4WGK chain B(all domains)
UniProt: Q9NR71 (all domains)
Gene: ASAH2

Molecule: Neutral ceramidase

3D Structure

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Related Domains

Browse other domains in Ceramidase_alk →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMocoBD/DmpA-related(231)

HH-groupMocoBD/DmpA-related(231.1)

TT-groupNeutral ceramidase large domain(231.1.3)

FFamilyCeramidase_alk(231.1.3.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal
Chloride ion

Pfam Families

PF04734Ceramidase_alk

Neutral/alkaline non-lysosomal ceramidase, N-terminal

ClanCL0635DmpA_ArgJ

External Links

ECOD PDB View: 4WGK RCSB PDB: 4WGK PDBe: 4WGK UniProt: Q9NR71

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

+ 3 additives (Citric acid, Phosphate ion, 1,2-ETHANEDIOL)

Citric acidCIT
DrugBank DB04272
Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.