ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xybB2 - ECOD Domain | ECOD

ECOD/Domains/e4xybB2

e4xybB2

UID: 001565300

PDB

Range: B:2-148,B:337-385
PDB: 4XYB chain B(all domains)
UniProt: G8NVB5 (all domains)
Gene: AciX8_2172

Molecule: Formate dehydrogenase

3D Structure

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Related Domains

Browse other domains in 2-Hacid_dh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFormate/glycerate dehydrogenase catalytic domain-like(2003.1.11)

FFamily2-Hacid_dh(2003.1.11.1)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338
Azide ionAZI

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF003892-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4XYB RCSB PDB: 4XYB PDBe: 4XYB UniProt: G8NVB5

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.