ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qi8B1 - ECOD Domain | ECOD

ECOD/Domains/e4qi8B1

e4qi8B1

UID: 001566338

PDB

Range: B:1-214
PDB: 4QI8 chain B(all domains)
UniProt: Q1K4Q1 (all domains)
Gene: gh61-6

Molecule: Lytic polysaccharide monooxygenase

3D Structure

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Related Domains

Browse other domains in AA9 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyAA9(11.1.1.57)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metal

+ 1 additive (Nitrate)

NitrateNO3
DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Auxiliary Activity family 9 (formerly GH61)

ClanCL0159E-set

External Links

ECOD PDB View: 4QI8 RCSB PDB: 4QI8 PDBe: 4QI8 UniProt: Q1K4Q1

Downloads

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