ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rrfD1 - ECOD Domain | ECOD

ECOD/Domains/e4rrfD1

e4rrfD1

UID: 001566424

PDB

Range: D:5-143
PDB: 4RRF chain D(all domains)
UniProt: Q58597 (all domains)
Gene: thrS

Molecule: Threonine--tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA-Thr_ED →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupDTD-like(2494)

HH-groupDTD-like (Pfam 02580)(2494.1)

TT-groupDTD-like (Pfam 02580)(2494.1.1)

FFamilytRNA-Thr_ED(2494.1.1.2)

Ligands

in contact, ≤ 4 Å

Serine-3'-aminoadenosineA3S
drugDrugBank DB04024
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF08915tRNA-Thr_ED

Archaea-specific editing domain of threonyl-tRNA synthetase

External Links

ECOD PDB View: 4RRF RCSB PDB: 4RRF PDBe: 4RRF UniProt: Q58597

Downloads

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