ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rrlA1 - ECOD Domain | ECOD

ECOD/Domains/e4rrlA1

e4rrlA1

UID: 001566435

PDB

Range: A:1-136
PDB: 4RRL chain A(all domains)
UniProt: Q9YFY3 (all domains)
Gene: thrS2

Molecule: Probable threonine--tRNA ligase 2

3D Structure

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Related Domains

Browse other domains in tRNA-Thr_ED →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupDTD-like(2494)

HH-groupDTD-like (Pfam 02580)(2494.1)

TT-groupDTD-like (Pfam 02580)(2494.1.1)

FFamilytRNA-Thr_ED(2494.1.1.2)

Ligands

in contact, ≤ 4 Å

Serine-3'-aminoadenosineA3S
drugDrugBank DB04024

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08915tRNA-Thr_ED

Archaea-specific editing domain of threonyl-tRNA synthetase

External Links

ECOD PDB View: 4RRL RCSB PDB: 4RRL PDBe: 4RRL UniProt: Q9YFY3

Downloads

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