ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xavB1 - ECOD Domain | ECOD

ECOD/Domains/e4xavB1

e4xavB1

UID: 001566662

PDB

Range: B:299-542
PDB: 4XAV chain B(all domains)
UniProt: Q8BMF8 (all domains)
Gene: Gldn

Molecule: Gliomedin

3D Structure

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Related Domains

Browse other domains in OLF →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyOLF(5.1.3.9)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Olfactomedin-like domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4XAV RCSB PDB: 4XAV PDBe: 4XAV UniProt: Q8BMF8

Downloads

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