ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yt9A1 - ECOD Domain | ECOD

ECOD/Domains/e4yt9A1

e4yt9A1

UID: 001566891

PDB

Range: A:44-464
PDB: 4YT9 chain A(all domains)
UniProt: Q9RQJ2 (all domains)
Gene: PG_1424

Molecule: Peptidylarginine deiminase

3D Structure

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Related Domains

Browse other domains in PAD_porph →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPentein(232)

HH-groupPentein(232.1)

TT-groupPentein(232.1.1)

FFamilyPAD_porph(232.1.1.4)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04371PAD_porph

Porphyromonas-type peptidyl-arginine deiminase

ClanCL0197GME

External Links

ECOD PDB View: 4YT9 RCSB PDB: 4YT9 PDBe: 4YT9 UniProt: Q9RQJ2

Downloads

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